scPDB - Distribution of Binding site Similarity values of 2o2q entry / Site 4

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
2o2q	NAP	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1.5.1.6

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
2o2q	NAP	Cytosolic 10-formyltetrahydrofolate dehydrogenase	1.5.1.6	1.000
1o04	NAD	Aldehyde dehydrogenase, mitochondrial	1.2.1.3	0.501
2onp	NAD	Aldehyde dehydrogenase, mitochondrial	1.2.1.3	0.480
3haz	NAD	Bifunctional protein PutA	/	0.470
4zz7	NAD	Methylmalonate-semialdehyde dehydrogenase	/	0.470
4fqf	NAD	Aldehyde dehydrogenase, mitochondrial	1.2.1.3	0.469
3n82	NAD	Aldehyde dehydrogenase, mitochondrial	1.2.1.3	0.459
1o01	NAD	Aldehyde dehydrogenase, mitochondrial	1.2.1.3	0.457
3v9l	NAD	Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial	1.2.1.88	0.455
4pz2	NAD	Aldehyde dehydrogenase 2-6	/	0.453
1o02	NAD	Aldehyde dehydrogenase, mitochondrial	1.2.1.3	0.449
1nzz	NAI	Aldehyde dehydrogenase, mitochondrial	1.2.1.3	0.442
1o00	NAD	Aldehyde dehydrogenase, mitochondrial	1.2.1.3	0.442