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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2j9hGTXGlutathione S-transferase P2.5.1.18

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2j9hGTXGlutathione S-transferase P2.5.1.181.000
1pgtGTXGlutathione S-transferase P2.5.1.180.647
17gsGTXGlutathione S-transferase P2.5.1.180.643
2glrGTXGlutathione S-transferase P 12.5.1.180.623
2oadGTBGlutathione S-transferase P 12.5.1.180.612
12gs0HHGlutathione S-transferase P2.5.1.180.607
2oa7GTXGlutathione S-transferase P 12.5.1.180.604
1aqxGTDGlutathione S-transferase P2.5.1.180.596
1gtiGTBGlutathione S-transferase P 12.5.1.180.596
2a2sGSNGlutathione S-transferase P2.5.1.180.593
4pgtGBXGlutathione S-transferase P2.5.1.180.574
13gsSASGlutathione S-transferase P2.5.1.180.573
9gssGTXGlutathione S-transferase P2.5.1.180.572
3pgtGBXGlutathione S-transferase P2.5.1.180.564
20gsCBDGlutathione S-transferase P2.5.1.180.563
3ie3N11Glutathione S-transferase P2.5.1.180.546
1tu8GTXGlutathione S-transferase 22.5.1.180.541
3gusN11Glutathione S-transferase P2.5.1.180.536
2pgtGPRGlutathione S-transferase P2.5.1.180.514
1gssLEEGlutathione S-transferase P2.5.1.180.502
1aqv0HGGlutathione S-transferase P2.5.1.180.497
3csjCBLGlutathione S-transferase P2.5.1.180.494
3o76GTBGlutathione S-transferase P 12.5.1.180.469
1n95HFPProtein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha/0.466
1n95HFPProtein farnesyltransferase subunit beta2.5.1.580.466
1b2lNDCAlcohol dehydrogenase1.1.1.10.460
3ai3NDPNADPH-sorbose reductase/0.459
2gevCOKPantothenate kinase2.7.1.330.454
2gstGPSGlutathione S-transferase Mu 12.5.1.180.454
3e32ED2Protein farnesyltransferase subunit beta2.5.1.580.453
3n9jEAAGlutathione S-transferase P2.5.1.180.453
3dy85GPHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.449
3br3ETHTH-type transcriptional regulator QacR/0.445
3buvNAP3-oxo-5-beta-steroid 4-dehydrogenase/0.444
3dynPCGHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.444
3udq09EBeta-secretase 13.4.23.460.444
1s64778Geranylgeranyl transferase type-1 subunit beta2.5.1.590.443
1xddAAYIntegrin alpha-L/0.442
2vqbNAPPutative flavin-containing monooxygenase/0.442
2wzySQXSoluble acetylcholine receptor/0.440
4bfsZVSPantothenate kinase2.7.1.330.440
4eagATP5'-AMP-activated protein kinase subunit gamma-1/0.440
4gh6LUOHigh affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A/0.440