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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2iebZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2iebZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
2ie0ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.641
2aqiNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.625
2aqkNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.608
2h9iEADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.555
4trnNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.546
4oxyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.538
4zjuNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.515
2b37NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.501
4o1mNADEnoyl-acyl carrier reductase/0.482
5koiNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.481
1vrwNAIEnoyl-ACP reductase/0.473
2wyvNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.473
2ntvP1HEnoyl-[acyl-carrier-protein] reductase [NADH]/0.459
2nq8ZIDEnoyl-ACP reductase/0.457
4m87NADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.455
2nv6ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.453
1zidZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.452
2idzZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.448
1wntNAPL-xylulose reductase1.1.1.100.441
2q2vNADBeta-D-hydroxybutyrate dehydrogenase/0.441