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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2ie0ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2ie0ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
2iebZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.595
2aqiNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.567
2aqkNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.560
4trnNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.519
2h9iEADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.516
2ntvP1HEnoyl-[acyl-carrier-protein] reductase [NADH]/0.490
2b37NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.469
2idzZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.469
4zjuNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.455
4oxyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.453
2nv6ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.452
2wyvNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.446
4o1mNADEnoyl-acyl carrier reductase/0.440