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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2gywOBIAcetylcholinesterase3.1.1.7

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2gywOBIAcetylcholinesterase3.1.1.71.000
2xuhTZ4Acetylcholinesterase3.1.1.70.656
2jf0HBPAcetylcholinesterase3.1.1.70.633
2xufTZ4Acetylcholinesterase3.1.1.70.602
2xukTZ5Acetylcholinesterase3.1.1.70.601
2xuqTZ4Acetylcholinesterase3.1.1.70.597
2xuoTZ4Acetylcholinesterase3.1.1.70.585
2xugTZ4Acetylcholinesterase3.1.1.70.576
2xujTZ5Acetylcholinesterase3.1.1.70.572
1q83TZ5Acetylcholinesterase3.1.1.70.548
2ha6SCKAcetylcholinesterase3.1.1.70.540
2j3qTFLAcetylcholinesterase3.1.1.70.525
2gyuHI6Acetylcholinesterase3.1.1.70.522
1odcA8BAcetylcholinesterase3.1.1.70.518
2ckmAA7Acetylcholinesterase3.1.1.70.510
4m0f1YKAcetylcholinesterase3.1.1.70.495
2w6cBM4Acetylcholinesterase3.1.1.70.493
1h22E10Acetylcholinesterase3.1.1.70.492
1u65CP0Acetylcholinesterase3.1.1.70.492
4arbC57Acetylcholinesterase3.1.1.70.491
4b7zQ4QAcetylcholinesterase3.1.1.70.487
2xuiTZ5Acetylcholinesterase3.1.1.70.486
4ey7E20Acetylcholinesterase3.1.1.70.485
1eveE20Acetylcholinesterase3.1.1.70.481
2xupTZ5Acetylcholinesterase3.1.1.70.480
1w4lGL8Acetylcholinesterase3.1.1.70.479
2cekN8TAcetylcholinesterase3.1.1.70.464
4araC56Acetylcholinesterase3.1.1.70.460
1zgbA1EAcetylcholinesterase3.1.1.70.449
2wu4HBPAcetylcholinesterase3.1.1.70.440