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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
2adaHPRAdenosine deaminase3.5.4.4

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
2adaHPRAdenosine deaminase3.5.4.41.000
1fkxPRHAdenosine deaminase3.5.4.40.838
1fkwPURAdenosine deaminase3.5.4.40.699
1a4lDCFAdenosine deaminase3.5.4.40.548
1wxyFRKAdenosine deaminase3.5.4.40.522
1ndzFR5Adenosine deaminase3.5.4.40.519
2z7gEH9Adenosine deaminase3.5.4.40.515
1qxlFR8Adenosine deaminase3.5.4.40.513
1v79FR7Adenosine deaminase3.5.4.40.511
1ndyFR3Adenosine deaminase3.5.4.40.508
1umlFR4Adenosine deaminase3.5.4.40.504
1uioHPRAdenosine deaminase3.5.4.40.501
1v7aFRCAdenosine deaminase3.5.4.40.500
1o5rFR9Adenosine deaminase3.5.4.40.493
4nt3ZAWLactoperoxidase1.11.1.70.465
3g7jGTXGlutathione transferase GST1-4/0.454
1x8lOXRRetinol dehydratase/0.453
3djfBC3Purine nucleoside phosphorylase/0.448
3zvuA8SAbscisic acid receptor PYR1/0.447
4bb3KKAIsopenicillin N synthase1.21.3.10.443
2vczVC3Hematopoietic prostaglandin D synthase/0.442
4qemHC4Phospholipase A2 VRV-PL-VIIIa/0.442
1zgv501Prothrombin3.4.21.50.440
2b8jADNClass B acid phosphatase3.1.3.20.440