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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1zidZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.9

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1zidZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.91.000
2pr2DG1Enoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.617
2ntvP1HEnoyl-[acyl-carrier-protein] reductase [NADH]/0.615
2nv6ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.563
2iebZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.555
2ntjP1HEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.544
3oewNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.522
3of2NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.520
2aqhNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.515
4zjuNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.512
4dquNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.510
2idzZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.506
4dtiNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.505
4trnNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.503
2aqiNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.501
3oeyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.497
2aqkNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.496
4dreNAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.494
5cpbNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.493
1bvrNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.491
5koiNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.486
2ie0ZIDEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.485
4biiPYWEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.484
4oxyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.481
2wyvNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.477
1enyNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.475
1p44NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.473
2aq8NAIEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.471
4o1mNADEnoyl-acyl carrier reductase/0.470
1g6kNADGlucose 1-dehydrogenase1.1.1.470.467
3uicNADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.459
2b37NADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.458
2getCOKPantothenate kinase2.7.1.330.454
4fw8NAI3-oxoacyl-(Acyl-carrier-protein) reductase/0.452
4m87NADEnoyl-[acyl-carrier-protein] reductase [NADH]/0.450
3nxuRITCytochrome P450 3A4/0.442
4q71FADBifunctional protein PutA/0.441
1enzNADEnoyl-[acyl-carrier-protein] reductase [NADH]1.3.1.90.440