Binding Sites are compared using Shaper.
For more information, please see the following publication:
Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
1sx4 | ADP | 60 kDa chaperonin |
PDB ID | HET | Uniprot Name | EC Number | Binding Site Similarity |
Align |
---|---|---|---|---|---|
1sx4 | ADP | 60 kDa chaperonin | / | 1.000 | |
1pf9 | ADP | 60 kDa chaperonin | / | 0.622 | |
4ki8 | ADP | 60 kDa chaperonin | / | 0.608 | |
3rus | ADP | Chaperonin | / | 0.503 | |
1kp8 | AGS | 60 kDa chaperonin | / | 0.474 | |
3ruq | ADP | Chaperonin | / | 0.465 | |
1q3q | ANP | Thermosome subunit alpha | / | 0.462 | |
1q3s | ADP | Thermosome subunit alpha | / | 0.456 |