Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1rywEPUUDP-N-acetylglucosamine 1-carboxyvinyltransferase

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1rywEPUUDP-N-acetylglucosamine 1-carboxyvinyltransferase/1.000
3swqEPUUDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.598
3v4tUD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.598
1q3gUDAUDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.593
3issEPUUDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.585
4r7uUD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.566
1a2nTETUDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.561
3vcyUD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.552
2rl1UD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.550
3kqjUD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.517
2yvwEPUUDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.514
2rl2UD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.512
1uaeUD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.498
3upkUD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.493
3kr6UD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.483
3lthUD1UDP-N-acetylglucosamine 1-carboxyvinyltransferase/0.469