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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1pw6FRBInterleukin-2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity
Align
1pw6FRBInterleukin-2/1.000
1qbgFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.455
4uymVOR14-alpha sterol demethylase Cyp51B/0.455
3oqkS52Renin3.4.23.150.450
1h69FADNAD(P)H dehydrogenase [quinone] 11.6.5.20.448
2cf6NAPCinnamyl alcohol dehydrogenase 51.1.1.1950.447
1kboFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.445
2i4qUA4Renin3.4.23.150.445
4bb3KKAIsopenicillin N synthase1.21.3.10.445
1kbo340NAD(P)H dehydrogenase [quinone] 11.6.5.20.443
4uwmFMN3,6-diketocamphane 1,6 monooxygenase1.14.130.443
4lva20MNicotinamide phosphoribosyltransferase2.4.2.120.440
5a4kFADNAD(P)H dehydrogenase [quinone] 11.6.5.20.440
5dp2NAPCurF/0.440