Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1pt9TAPNAD(P) transhydrogenase, mitochondrial1.6.1.2

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1pt9TAPNAD(P) transhydrogenase, mitochondrial1.6.1.21.000
1u31NDPNAD(P) transhydrogenase, mitochondrial1.6.1.20.737
1djlNAPNAD(P) transhydrogenase, mitochondrial1.6.1.20.611
1d4oNAPNAD(P) transhydrogenase, mitochondrial/0.570
1pnoNAPNAD(P) transhydrogenase subunit beta1.6.1.20.512
2fsvNAPNAD(P) transhydrogenase subunit beta1.6.1.20.510
1nm5NAPNAD(P) transhydrogenase subunit beta1.6.1.20.500
4j1tNAPNAD(P) transhydrogenase subunit beta/0.478
1hzzNAPNAD(P) transhydrogenase subunit beta1.6.1.20.465
2fr8NAPNAD(P) transhydrogenase subunit beta1.6.1.20.462