scPDB - Distribution of Binding site Similarity values of 1nw5 entry / Site 1

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1nw5	SAM	Modification methylase RsrI	2.1.1.72

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1nw5	SAM	Modification methylase RsrI	2.1.1.72	1.000
1nw6	SFG	Modification methylase RsrI	2.1.1.72	0.685
1eg2	MTA	Modification methylase RsrI	2.1.1.72	0.499
4rtl	SFG	DNA adenine methylase	2.1.1.72	0.463
2ore	SAH	DNA adenine methylase	2.1.1.72	0.454
4gbe	SAH	DNA adenine methylase	2.1.1.72	0.443
2g1p	SAH	DNA adenine methylase	2.1.1.72	0.441
4rtm	SAM	DNA adenine methylase	2.1.1.72	0.440