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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1jnrFADAdenylylsulfate reductase, subunit A (AprA)

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1jnrFADAdenylylsulfate reductase, subunit A (AprA)/1.000
2fjaFADAdenylylsulfate reductase, subunit A (AprA)/0.734
1jnzFADAdenylylsulfate reductase, subunit A (AprA)/0.715
2fjdSFDAdenylylsulfate reductase, subunit A (AprA)/0.598
2fjbSFDAdenylylsulfate reductase, subunit A (AprA)/0.525
2fjeFADAdenylylsulfate reductase, subunit A (AprA)/0.515
2rgoFADAlpha-Glycerophosphate Oxidase/0.476
4kx6FADFumarate reductase flavoprotein subunit1.3.5.40.455
3vqrFADPutative oxidoreductase/0.452
3jynNDPQuinone oxidoreductase/0.443
2po7CHDFerrochelatase, mitochondrial4.99.1.10.440