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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Binding site similarity measured by Shaper
You can zoom onto the graph by using the mouse to make a selection

Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :
PDB IDHETUniprot NameEC Number
1dayGNPCasein kinase II subunit alpha2.7.11.1

Complex with similar binding sites

PDB ID HET Uniprot Name EC Number Binding Site
Similarity		 Align
1dayGNPCasein kinase II subunit alpha2.7.11.11.000
1dawANPCasein kinase II subunit alpha2.7.11.10.686
4lfiGNPCasein kinase II subunit alpha2.7.11.10.506
1lp4ANPCasein kinase II subunit alpha2.7.11.10.483
2pvhP19Casein kinase II subunit alpha2.7.11.10.454
4anmWULCasein kinase II subunit alpha2.7.11.10.452
2pvnP63Casein kinase II subunit alpha2.7.11.10.446