scPDB - Distribution of Binding site Similarity values of 1d4a entry / Site 2

Distribution of Binding site similarity measured by Shaper

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Binding Sites are compared using Shaper.
For more information, please see the following publication: Desaphy J. et al. Comparison and Druggability Prediction of protein-Ligand Binding sites from pharmacophore-annotated cavity shapes J. Chem. Inf. Model., 2012, 52(8), pp2287-2299
Binding Sites are considered as similar when the similarity value is greater than 0.44

Reference Protein Data Bank Entry :

PDB ID	HET	Uniprot Name	EC Number
1d4a	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2

Complex with similar binding sites

PDB ID	HET	Uniprot Name	EC Number	Binding Site Similarity
1d4a	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	1.000
1kbo	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.731
1dxo	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.715
1h66	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.626
1gg5	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.605
1h69	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.600
1kbq	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.575
5a4k	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.575
1dxq	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.573
5eai	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.554
1qbg	FAD	NAD(P)H dehydrogenase [quinone] 1	1.6.5.2	0.553