Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
4y6g | F6F | Tryptophan synthase alpha chain |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
4y6g | F6F | Tryptophan synthase alpha chain | / | 1.032 | |
2clf | F6F | Tryptophan synthase alpha chain | / | 0.925 | |
4zqc | F6F | Tryptophan synthase alpha chain | / | 0.830 | |
2cle | F6F | Tryptophan synthase alpha chain | / | 0.824 | |
2clm | F6F | Tryptophan synthase alpha chain | / | 0.759 | |
2rh9 | IGP | Tryptophan synthase alpha chain | / | 0.745 | |
4xug | F9F | Tryptophan synthase alpha chain | / | 0.739 | |
1k8y | 13P | Tryptophan synthase alpha chain | / | 0.721 | |
1kfc | IPL | Tryptophan synthase alpha chain | / | 0.685 |