Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4okt 198 Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4okt 198Androgen receptor / 1.257
4ojb 198Androgen receptor / 1.077
4okx 198Androgen receptor / 0.998
1z95 198Androgen receptor / 0.966
4okb 198Androgen receptor / 0.920
4olm 198Androgen receptor / 0.889
4oha HFTAndrogen receptor / 0.872
4ogh HFTAndrogen receptor / 0.810
4oh5 HFTAndrogen receptor / 0.793
4okw 198Androgen receptor / 0.791
4ok1 198Androgen receptor / 0.707
4e5f 0N7Polymerase acidic protein / 0.667
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.660
5ikr ID8Prostaglandin G/H synthase 2 1.14.99.1 0.655