sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 4ofr | DHT | Androgen receptor |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 4ofr | DHT | Androgen receptor | / | 1.246 | |
| 1t7r | DHT | Androgen receptor | / | 1.123 | |
| 1t79 | DHT | Androgen receptor | / | 1.116 | |
| 4oey | DHT | Androgen receptor | / | 1.112 | |
| 2pit | DHT | Androgen receptor | / | 1.111 | |
| 2pkl | DHT | Androgen receptor | / | 1.107 | |
| 1t7m | DHT | Androgen receptor | / | 1.085 | |
| 2piq | DHT | Androgen receptor | / | 1.083 | |
| 2q7i | TES | Androgen receptor | / | 1.082 | |
| 1t74 | DHT | Androgen receptor | / | 1.079 | |
| 1t76 | DHT | Androgen receptor | / | 1.078 | |
| 4oez | DHT | Androgen receptor | / | 1.075 | |
| 2pip | DHT | Androgen receptor | / | 1.073 | |
| 2ama | DHT | Androgen receptor | / | 1.071 | |
| 4oea | DHT | Androgen receptor | / | 1.071 | |
| 1t5z | DHT | Androgen receptor | / | 1.069 | |
| 2piw | DHT | Androgen receptor | / | 1.066 | |
| 1t73 | DHT | Androgen receptor | / | 1.063 | |
| 2pio | DHT | Androgen receptor | / | 1.063 | |
| 1t65 | DHT | Androgen receptor | / | 1.062 | |
| 2ylp | TES | Androgen receptor | / | 1.037 | |
| 2pix | DHT | Androgen receptor | / | 1.010 | |
| 4hlw | TES | Androgen receptor | / | 0.996 | |
| 2z4j | DHT | Androgen receptor | / | 0.973 | |
| 2q7k | TES | Androgen receptor | / | 0.954 | |
| 1t7f | DHT | Androgen receptor | / | 0.947 | |
| 2pnu | ENM | Androgen receptor | / | 0.896 | |
| 2piu | DHT | Androgen receptor | / | 0.883 | |
| 1t7t | DHT | Androgen receptor | / | 0.871 | |
| 2ao6 | R18 | Androgen receptor | / | 0.858 | |
| 2ylq | TES | Androgen receptor | / | 0.841 | |
| 1t63 | DHT | Androgen receptor | / | 0.839 | |
| 2piv | DHT | Androgen receptor | / | 0.834 | |
| 4ofu | DHT | Androgen receptor | / | 0.832 | |
| 2q7l | TES | Androgen receptor | / | 0.811 | |
| 1xj7 | DHT | Androgen receptor | / | 0.786 | |
| 2q7j | TES | Androgen receptor | / | 0.767 | |
| 4oed | DHT | Androgen receptor | / | 0.767 | |
| 3zqt | TES | Androgen receptor | / | 0.766 | |
| 2pir | DHT | Androgen receptor | / | 0.755 | |
| 3uzz | ASD | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.732 | |
| 1qyw | 5SD | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.718 | |
| 1lho | AOM | Sex hormone-binding globulin | / | 0.715 | |
| 3ols | EST | Estrogen receptor beta | / | 0.713 | |
| 3uzx | AOX | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.713 | |
| 1ya3 | STR | Mineralocorticoid receptor | / | 0.712 | |
| 1g50 | EST | Estrogen receptor | / | 0.710 | |
| 1lri | CLR | Beta-elicitin cryptogein | / | 0.709 | |
| 4k7a | DHT | Androgen receptor | / | 0.709 | |
| 3oll | EST | Estrogen receptor beta | / | 0.706 | |
| 1xf0 | ASD | Aldo-keto reductase family 1 member C3 | / | 0.705 | |
| 3uzx | AOM | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.698 | |
| 1sqn | NDR | Progesterone receptor | / | 0.695 | |
| 4j24 | EST | Estrogen receptor beta | / | 0.695 | |
| 1jtv | TES | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.694 | |
| 1coy | AND | Cholesterol oxidase | 1.1.3.6 | 0.693 | |
| 1ot7 | CHC | Bile acid receptor | / | 0.691 | |
| 1xu7 | CPS | Corticosteroid 11-beta-dehydrogenase isozyme 1 | 1.1.1.146 | 0.689 | |
| 3w5q | 3KL | Vitamin D3 receptor | / | 0.689 | |
| 2mm3 | CHO | Gastrotropin | / | 0.688 | |
| 2yja | EST | Estrogen receptor | / | 0.688 | |
| 3l03 | 4OH | Estrogen receptor | / | 0.687 | |
| 4j26 | EST | Estrogen receptor beta | / | 0.687 | |
| 1e3k | R18 | Progesterone receptor | / | 0.686 | |
| 2d06 | EST | Sulfotransferase 1A1 | 2.8.2.1 | 0.685 | |
| 4l1x | STR | Aldo-keto reductase family 1 member C2 | / | 0.685 | |
| 4q0a | 4OA | Vitamin D3 receptor A | / | 0.684 | |
| 2ylo | TES | Androgen receptor | / | 0.680 | |
| 2yhd | TES | Androgen receptor | / | 0.679 | |
| 1qyx | ASD | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.678 | |
| 3cot | STR | 3-oxo-5-beta-steroid 4-dehydrogenase | / | 0.678 | |
| 3iw1 | ASD | Steroid C26-monooxygenase | 1.14.13.141 | 0.677 | |
| 5hyr | EST | Estrogen receptor | / | 0.675 | |
| 2g5o | DRQ | Estrogen receptor | / | 0.674 | |
| 1d2s | DHT | Sex hormone-binding globulin | / | 0.671 | |
| 3nbr | ASD | Steroid Delta-isomerase | 5.3.3.1 | 0.670 | |
| 3uud | EST | Estrogen receptor | / | 0.668 | |
| 2oax | SNL | Mineralocorticoid receptor | / | 0.667 | |
| 4e5l | DBH | Polymerase acidic protein | / | 0.667 | |
| 3nhx | ASD | Steroid Delta-isomerase | 5.3.3.1 | 0.665 | |
| 3q95 | ESL | Estrogen receptor | / | 0.665 | |
| 4jvl | EST | Estrogen sulfotransferase | 2.8.2.4 | 0.665 | |
| 3w5t | LHP | Vitamin D3 receptor | / | 0.662 | |
| 3f3y | 4OA | Bile salt sulfotransferase | 2.8.2.14 | 0.660 | |
| 2rlc | CHD | Choloylglycine hydrolase | 3.5.1.24 | 0.657 | |
| 1i5r | HYC | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.656 | |
| 2qgt | EED | Estrogen receptor | / | 0.656 | |
| 1lhn | AON | Sex hormone-binding globulin | / | 0.655 | |
| 2qpy | DHT | Androgen receptor | / | 0.651 | |
| 3s79 | ASD | Aromatase | 1.14.14.14 | 0.651 | |
| 5dx3 | EST | Estrogen receptor | / | 0.651 | |
| 3dhe | AND | Estradiol 17-beta-dehydrogenase 1 | 1.1.1.62 | 0.650 |