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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4lrj ANP Uncharacterized protein

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4lrj ANPUncharacterized protein / 0.915
2zdg ADPD-alanine--D-alanine ligase / 0.693
4fl2 ANPTyrosine-protein kinase SYK 2.7.10.2 0.677
1m0w ANPGlutathione synthetase 6.3.2.3 0.675
2r86 ATP5-formaminoimidazole-4-carboxamide-1-(beta)-D-ribofuranosyl 5'-monophosphate synthetase / 0.665
4f99 ADPCell division cycle 7-related protein kinase 2.7.11.1 0.661
4fl3 ANPTyrosine-protein kinase SYK 2.7.10.2 0.661
3rv4 ADPBiotin carboxylase 6.3.4.14 0.660
3eps ATPIsocitrate dehydrogenase kinase/phosphatase / 0.658
4ux9 ANPMitogen-activated protein kinase 8 2.7.11.24 0.658
4f9a ADPCell division cycle 7-related protein kinase 2.7.11.1 0.654
4crs AGSSerine/threonine-protein kinase N2 2.7.11.13 0.652
5c1p ADPD-alanine--D-alanine ligase / 0.652
4h3q ANPMitogen-activated protein kinase 1 2.7.11.24 0.651
4oa9 ANPProtein BRASSINOSTEROID INSENSITIVE 1 2.7.10.1 0.650