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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
4li8 1XQ Tankyrase-1 2.4.2.30

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
4li8 1XQTankyrase-1 2.4.2.30 1.163
4msk 2C8Tankyrase-1 2.4.2.30 0.764
4li6 1XOTankyrase-1 2.4.2.30 0.763
3u9y 09LTankyrase-2 2.4.2.30 0.748
4msg 2C6Tankyrase-1 2.4.2.30 0.706
4tkg 09LTankyrase-2 2.4.2.30 0.704
3kr8 XAVTankyrase-2 2.4.2.30 0.696
4bux F35Tankyrase-2 2.4.2.30 0.686
4bud 29FTankyrase-2 2.4.2.30 0.682
4avw G18Tankyrase-2 2.4.2.30 0.674
4buf F36Tankyrase-2 2.4.2.30 0.671
4buv 16ITankyrase-2 2.4.2.30 0.670
4j21 AJ6Tankyrase-2 2.4.2.30 0.668
4bj9 UHBTankyrase-2 2.4.2.30 0.665
4j22 AJ7Tankyrase-2 2.4.2.30 0.664
4mt9 2D6Tankyrase-1 2.4.2.30 0.664
3c4h DRLPoly [ADP-ribose] polymerase 3 2.4.2.30 0.661
4l0t 1V0Tankyrase-2 2.4.2.30 0.661
4i9i 1DYTankyrase-1 2.4.2.30 0.659
4bjb P34Tankyrase-2 2.4.2.30 0.657
4buu F38Tankyrase-2 2.4.2.30 0.655
4bus 32FTankyrase-2 2.4.2.30 0.654
4iue AJ4Tankyrase-2 2.4.2.30 0.651
5ds3 09LPoly [ADP-ribose] polymerase 1 2.4.2.30 0.650