Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3vs5 VSG Tyrosine-protein kinase HCK 2.7.10.2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3vs5 VSGTyrosine-protein kinase HCK 2.7.10.2 1.014
3vs4 VSFTyrosine-protein kinase HCK 2.7.10.2 0.927
3vry B43Tyrosine-protein kinase HCK 2.7.10.2 0.851
2c0t L3GTyrosine-protein kinase HCK 2.7.10.2 0.849
2c0i L1GTyrosine-protein kinase HCK 2.7.10.2 0.830
3vs6 VSHTyrosine-protein kinase HCK 2.7.10.2 0.829
1qcf PP1Tyrosine-protein kinase HCK 2.7.10.2 0.781
3vs0 VS0Tyrosine-protein kinase HCK 2.7.10.2 0.780
3vs1 VSATyrosine-protein kinase HCK 2.7.10.2 0.780
2c0o L2GTyrosine-protein kinase HCK 2.7.10.2 0.757
4e5i 0N9Polymerase acidic protein / 0.744
4dgg I76Proto-oncogene tyrosine-protein kinase Src 2.7.10.2 0.731
3vs7 KS1Tyrosine-protein kinase HCK 2.7.10.2 0.716
1qpe PP2Tyrosine-protein kinase Lck 2.7.10.2 0.709
3l8p 0CEAngiopoietin-1 receptor 2.7.10.1 0.694
2ivv PP1Proto-oncogene tyrosine-protein kinase receptor Ret 2.7.10.1 0.691
3vs3 VSETyrosine-protein kinase HCK 2.7.10.2 0.668
2z7q ACPRibosomal protein S6 kinase alpha-1 2.7.11.1 0.662
3vs2 VSBTyrosine-protein kinase HCK 2.7.10.2 0.660
4e5f 0N7Polymerase acidic protein / 0.660
4mxa BK7Calmodulin-like domain protein kinase isoenzyme gamma, related / 0.660
2cgw 3C3Serine/threonine-protein kinase Chk1 2.7.11.1 0.659