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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3uzp 0CK Casein kinase I isoform delta 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3uzp 0CKCasein kinase I isoform delta 2.7.11.1 1.121
3uyt 0CKCasein kinase I isoform delta 2.7.11.1 0.827
4loo SB4Mitogen-activated protein kinase 14 / 0.754
4kbc 1QJCasein kinase I isoform delta 2.7.11.1 0.741
4kba 1QMCasein kinase I isoform delta 2.7.11.1 0.709
3hl7 I47Mitogen-activated protein kinase 14 / 0.707
1bmk SB5Mitogen-activated protein kinase 14 / 0.690
4c3f 7KWTyrosine-protein kinase Lck 2.7.10.2 0.681
3zsg T75Mitogen-activated protein kinase 14 / 0.671
5ar4 SB2Receptor-interacting serine/threonine-protein kinase 2 2.7.11.1 0.664
3fmj FMJMitogen-activated protein kinase 14 / 0.661
3mpa SB2Mitogen-activated protein kinase 14 / 0.657
3ttj JBIMitogen-activated protein kinase 10 2.7.11.24 0.657
2ewa SB2Mitogen-activated protein kinase 14 / 0.655
2x9f X9FEphrin type-B receptor 4 2.7.10.1 0.653