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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3rqk H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.880
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.876
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.874
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.874
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.874
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.874
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.874
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.873
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.873
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.873
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.873
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.873
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.873
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.872
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.872
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.872
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.872
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.872
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.872
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.872
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.872
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.872
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.871
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.871
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.870
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.870
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.870
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.870
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.869
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.869
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.869
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.869
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.868
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.867
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.866
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.866
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.856
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.856
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.854
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.854
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.854
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.853
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.853
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.853
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.853
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.853
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.852
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.852
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.852
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.852
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.852
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.852
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.851
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.851
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.851
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.851
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.851
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.851
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.851
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.850
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.849
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.849
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.849
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.849
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.849
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.848
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.848
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.848
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.848
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.845
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.845
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.839
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.837
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.837
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.836
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.835
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.834
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.833
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.833
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.830
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.829
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.829
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.828
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.826
3png H4BNitric oxide synthase, brain 1.14.13.39 0.819
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.818
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.818
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.816
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.812
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.806
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.805
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.805
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.791
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.791
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.786
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.785
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.773
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.753
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.733
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.720
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.713
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.682
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.679
1qw5 H4BNitric oxide synthase, inducible 1.14.13.39 0.676
3e7g H4BNitric oxide synthase, inducible 1.14.13.39 0.676
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.674
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.663
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.659