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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3q9y TXQ Casein kinase II subunit alpha 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3q9y TXQCasein kinase II subunit alpha 2.7.11.1 0.879
3q9z TXQCasein kinase II subunit alpha 2.7.11.1 0.800
3q9w EMOCasein kinase II subunit alpha 2.7.11.1 0.775
3c13 EMOCasein kinase II subunit alpha 2.7.11.1 0.770
4dgn LU2Casein kinase II subunit alpha 2.7.11.1 0.718
3fl5 TXQCasein kinase II subunit alpha 2.7.11.1 0.716
1m2p HNACasein kinase II subunit alpha 2.7.11.1 0.678
3axw TIDCasein kinase II subunit alpha 2.7.11.1 0.662