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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3jx3 H4B Nitric oxide synthase, brain 1.14.13.39

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3jx3 H4BNitric oxide synthase, brain 1.14.13.39 0.918
3jt5 H4BNitric oxide synthase, brain 1.14.13.39 0.914
4cx3 H4BNitric oxide synthase, brain 1.14.13.39 0.913
1zzu H4BNitric oxide synthase, brain 1.14.13.39 0.912
3nlz H4BNitric oxide synthase, brain 1.14.13.39 0.912
3pnf H4BNitric oxide synthase, brain 1.14.13.39 0.912
3rqm H4BNitric oxide synthase, brain 1.14.13.39 0.912
3ufu H4BNitric oxide synthase, brain 1.14.13.39 0.912
4cx4 H4BNitric oxide synthase, brain 1.14.13.39 0.912
1zzq H4BNitric oxide synthase, brain 1.14.13.39 0.911
1zzr H4BNitric oxide synthase, brain 1.14.13.39 0.911
2hx4 H4BNitric oxide synthase, brain 1.14.13.39 0.911
3jwt H4BNitric oxide synthase, brain 1.14.13.39 0.911
4cx5 H4BNitric oxide synthase, brain 1.14.13.39 0.911
4jsg H4BNitric oxide synthase, brain 1.14.13.39 0.911
3b3m H4BNitric oxide synthase, brain 1.14.13.39 0.910
3nlp H4BNitric oxide synthase, brain 1.14.13.39 0.910
3nnz H4BNitric oxide synthase, brain 1.14.13.39 0.910
4fvx H4BNitric oxide synthase, brain 1.14.13.39 0.910
3b3o H4BNitric oxide synthase, brain 1.14.13.39 0.909
3jwv H4BNitric oxide synthase, brain 1.14.13.39 0.909
3jx2 H4BNitric oxide synthase, brain 1.14.13.39 0.909
3b3n H4BNitric oxide synthase, brain 1.14.13.39 0.908
3jt7 H4BNitric oxide synthase, brain 1.14.13.39 0.908
3pne H4BNitric oxide synthase, brain 1.14.13.39 0.907
3n5y H4BNitric oxide synthase, brain 1.14.13.39 0.906
3rql H4BNitric oxide synthase, brain 1.14.13.39 0.906
3dqr H4BNitric oxide synthase, brain 1.14.13.39 0.905
3rqj H4BNitric oxide synthase, brain 1.14.13.39 0.905
3nlr H4BNitric oxide synthase, brain 1.14.13.39 0.904
4fw0 H4BNitric oxide synthase, brain 1.14.13.39 0.904
4jsi H4BNitric oxide synthase, brain 1.14.13.39 0.904
3jt8 H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nlv H4BNitric oxide synthase, brain 1.14.13.39 0.903
3nly H4BNitric oxide synthase, brain 1.14.13.39 0.903
1m00 H4BNitric oxide synthase, brain 1.14.13.39 0.902
3jwu H4BNitric oxide synthase, brain 1.14.13.39 0.900
3tym H4BNitric oxide synthase, brain 1.14.13.39 0.900
1mmv H4BNitric oxide synthase, brain 1.14.13.39 0.892
1p6k H4BNitric oxide synthase, brain 1.14.13.39 0.892
4d1o H4BNitric oxide synthase, endothelial 1.14.13.39 0.892
4k5g H4BNitric oxide synthase, brain 1.14.13.39 0.892
4lux H4BNitric oxide synthase, brain 1.14.13.39 0.892
3jta H4BNitric oxide synthase, brain 1.14.13.39 0.891
4fvy H4BNitric oxide synthase, brain 1.14.13.39 0.891
1k2u H4BNitric oxide synthase, brain 1.14.13.39 0.890
1rs6 H4BNitric oxide synthase, brain 1.14.13.39 0.890
3ufv H4BNitric oxide synthase, brain 1.14.13.39 0.890
1p6j H4BNitric oxide synthase, brain 1.14.13.39 0.889
3jt4 H4BNitric oxide synthase, brain 1.14.13.39 0.889
4fvz H4BNitric oxide synthase, brain 1.14.13.39 0.889
1rs7 H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nlw H4BNitric oxide synthase, brain 1.14.13.39 0.888
3nny H4BNitric oxide synthase, brain 1.14.13.39 0.888
4gqe H4BNitric oxide synthase, brain 1.14.13.39 0.888
4k5e H4BNitric oxide synthase, brain 1.14.13.39 0.888
5agl H4BNitric oxide synthase, brain 1.14.13.39 0.888
3jt3 H4BNitric oxide synthase, brain 1.14.13.39 0.887
3jt6 H4BNitric oxide synthase, brain 1.14.13.39 0.887
5agk H4BNitric oxide synthase, brain 1.14.13.39 0.887
3q9a H4BNitric oxide synthase, brain 1.14.13.39 0.886
3svp H4BNitric oxide synthase, brain 1.14.13.39 0.886
3ufw H4BNitric oxide synthase, brain 1.14.13.39 0.886
3jt9 H4BNitric oxide synthase, brain 1.14.13.39 0.885
3tyl H4BNitric oxide synthase, brain 1.14.13.39 0.884
5agp H4BNitric oxide synthase, brain 1.14.13.39 0.883
3jx4 H4BNitric oxide synthase, brain 1.14.13.39 0.882
1k2t H4BNitric oxide synthase, brain 1.14.13.39 0.875
3jx5 H4BNitric oxide synthase, brain 1.14.13.39 0.875
4imt H4BNitric oxide synthase, brain 1.14.13.39 0.875
3b3p H4BNitric oxide synthase, brain 1.14.13.39 0.873
3hsn H4BNitric oxide synthase, brain 1.14.13.39 0.873
3rqk H4BNitric oxide synthase, brain 1.14.13.39 0.873
4jsf H4BNitric oxide synthase, brain 1.14.13.39 0.873
3jx6 H4BNitric oxide synthase, brain 1.14.13.39 0.872
3nln H4BNitric oxide synthase, brain 1.14.13.39 0.872
3q99 H4BNitric oxide synthase, brain 1.14.13.39 0.872
4eux H4BNitric oxide synthase, brain 1.14.13.39 0.871
2hx3 H4BNitric oxide synthase, brain 1.14.13.39 0.870
4k5d H4BNitric oxide synthase, brain 1.14.13.39 0.870
3ufo H4BNitric oxide synthase, brain 1.14.13.39 0.869
3ufs H4BNitric oxide synthase, brain 1.14.13.39 0.869
4k5f H4BNitric oxide synthase, brain 1.14.13.39 0.868
3ufq H4BNitric oxide synthase, brain 1.14.13.39 0.867
3nlk H4BNitric oxide synthase, brain 1.14.13.39 0.866
3fc5 H4BNitric oxide synthase, brain 1.14.13.39 0.865
3nlo H4BNitric oxide synthase, brain 1.14.13.39 0.863
1zvl H4BNitric oxide synthase, brain 1.14.13.39 0.861
3png H4BNitric oxide synthase, brain 1.14.13.39 0.859
4imw H4BNitric oxide synthase, brain 1.14.13.39 0.857
3nlq H4BNitric oxide synthase, brain 1.14.13.39 0.853
3n5z H4BNitric oxide synthase, brain 1.14.13.39 0.850
3n61 H4BNitric oxide synthase, brain 1.14.13.39 0.850
3nlj H4BNitric oxide synthase, brain 1.14.13.39 0.850
4jsh H4BNitric oxide synthase, brain 1.14.13.39 0.847
1k2s H4BNitric oxide synthase, brain 1.14.13.39 0.840
3svq H4BNitric oxide synthase, brain 1.14.13.39 0.823
3ufr H4BNitric oxide synthase, brain 1.14.13.39 0.821
3ufp H4BNitric oxide synthase, brain 1.14.13.39 0.813
3nos H4BNitric oxide synthase, endothelial 1.14.13.39 0.812
3uft H4BNitric oxide synthase, brain 1.14.13.39 0.809
3n5v H4BNitric oxide synthase, brain 1.14.13.39 0.807
4jse H4BNitric oxide synthase, brain 1.14.13.39 0.807
1om5 H4BNitric oxide synthase, brain 1.14.13.39 0.802
4imu H4BNitric oxide synthase, brain 1.14.13.39 0.797
2g6i HBINitric oxide synthase, brain 1.14.13.39 0.758
4js9 H4BNitric oxide synthase, inducible 1.14.13.39 0.724
3e6o H4BNitric oxide synthase, inducible 1.14.13.39 0.720
1dwx H4BNitric oxide synthase, inducible 1.14.13.39 0.719
3dwj H4BNitric oxide synthase, inducible 1.14.13.39 0.707
1vaf H4BNitric oxide synthase, inducible 1.14.13.39 0.692
2y37 H4BNitric oxide synthase, inducible 1.14.13.39 0.691
3e7i H4BNitric oxide synthase, inducible 1.14.13.39 0.675
4e5f 0N7Polymerase acidic protein / 0.660
1r35 H4BNitric oxide synthase, inducible 1.14.13.39 0.659
4ug7 H4BNitric oxide synthase oxygenase 1.14.13.165 0.658
1m8e H4BNitric oxide synthase, inducible 1.14.13.39 0.653