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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3ics COA Coenzyme A disulfide reductase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3ics COACoenzyme A disulfide reductase / 1.641
3icr COACoenzyme A disulfide reductase / 1.560
3ict COACoenzyme A disulfide reductase / 1.102
3nta COAFAD-dependent pyridine nucleotide-disulphide oxidoreductase / 0.973
3nt6 COAFAD-dependent pyridine nucleotide-disulphide oxidoreductase / 0.950
3ntd COAFAD-dependent pyridine nucleotide-disulphide oxidoreductase / 0.896
4ocg COAFAD-dependent pyridine nucleotide-disulphide oxidoreductase / 0.849
3cgd COACoenzyme A disulfide reductase / 0.748
3cgb COACoenzyme A disulfide reductase / 0.744
3cge COACoenzyme A disulfide reductase / 0.737
3cgc COACoenzyme A disulfide reductase / 0.732
1t4c COAFormyl-CoA:oxalate CoA-transferase / 0.681
1wur 8DGGTP cyclohydrolase 1 / 0.660
2yjz NAPMetalloreductase STEAP4 1.16.1 0.658
3lzx NAPFerredoxin--NADP reductase 2 1.18.1.2 0.657
3ubm COAFormyl-CoA:oxalate CoA-transferase / 0.653