Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3hek BD0 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3hek BD0Heat shock protein HSP 90-alpha / 1.125
3k97 4CDHeat shock protein HSP 90-alpha / 0.800
4egk RDCHeat shock protein HSP 90-alpha / 0.800
2xab VHDHeat shock protein HSP 90-alpha / 0.790
1qy8 RDIEndoplasmin / 0.782
3k99 PFTHeat shock protein HSP 90-alpha / 0.764
4efu EFUHeat shock protein HSP 90-alpha / 0.758
2xx2 13CATP-dependent molecular chaperone HSP82 / 0.749
3eko PYUHeat shock protein HSP 90-alpha / 0.745
1u0z RDCEndoplasmin / 0.740
4egh 0OYHeat shock protein HSP 90-alpha / 0.733
2ccu 2D9Heat shock protein HSP 90-alpha / 0.732
2xjx XJXHeat shock protein HSP 90-alpha / 0.724
2byh 2D7Heat shock protein HSP 90-alpha / 0.721
2yi7 BZ8Heat shock protein HSP 90-alpha / 0.721
2ye4 2FYHeat shock protein HSP 90-alpha / 0.711
2yi5 YI5Heat shock protein HSP 90-alpha / 0.710
2vci 2GJHeat shock protein HSP 90-alpha / 0.703
2yjw YJWHeat shock protein HSP 90-alpha / 0.694
2xd6 XD6ATP-dependent molecular chaperone HSP82 / 0.692
3ekr PY9Heat shock protein HSP 90-alpha / 0.692
2yec XQ0Heat shock protein HSP 90-alpha / 0.676
2xx4 13IATP-dependent molecular chaperone HSP82 / 0.669
2ye9 2D4Heat shock protein HSP 90-alpha / 0.669
4ce1 7FKATP-dependent molecular chaperone HSP82 / 0.666
4ce2 BO5ATP-dependent molecular chaperone HSP82 / 0.665
2bt0 CT5Heat shock protein HSP 90-alpha / 0.663
2vcj 2EQHeat shock protein HSP 90-alpha / 0.657
1yc3 4BCHeat shock protein HSP 90-alpha / 0.655
2gfd RDAEndoplasmin / 0.654
2cct 2E1Heat shock protein HSP 90-alpha / 0.650