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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fmk FMK Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3fmk FMKMitogen-activated protein kinase 14 / 0.960
3flw FLWMitogen-activated protein kinase 14 / 0.867
3fly FLYMitogen-activated protein kinase 14 / 0.813
3fkn FKNMitogen-activated protein kinase 14 / 0.795
3fi4 FI4Mitogen-activated protein kinase 14 / 0.788
3fmm XI2Mitogen-activated protein kinase 14 / 0.785
3flz FLZMitogen-activated protein kinase 14 / 0.744
3hvc GG5Mitogen-activated protein kinase 14 / 0.737
1yw2 PGJMitogen-activated protein kinase 14 / 0.706
3fl4 FL4Mitogen-activated protein kinase 14 / 0.695
2qd9 LGFMitogen-activated protein kinase 14 / 0.688
3obg SB2Mitogen-activated protein kinase 14 / 0.687
1zz2 B11Mitogen-activated protein kinase 14 / 0.685
3kf7 L9GMitogen-activated protein kinase 14 / 0.676
1bl6 SB6Mitogen-activated protein kinase 14 / 0.667
3nww 3NWMitogen-activated protein kinase 14 / 0.662
1ouk 084Mitogen-activated protein kinase 14 / 0.656
3hl7 I47Mitogen-activated protein kinase 14 / 0.653
3fls FLSMitogen-activated protein kinase 14 / 0.652