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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3fl5 TXQ Casein kinase II subunit alpha 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3fl5 TXQCasein kinase II subunit alpha 2.7.11.1 0.946
4dgo 0JWCasein kinase II subunit alpha 2.7.11.1 0.781
1m2p HNACasein kinase II subunit alpha 2.7.11.1 0.762
3q9z TXQCasein kinase II subunit alpha 2.7.11.1 0.739
3bqc EMOCasein kinase II subunit alpha 2.7.11.1 0.723
3q9y TXQCasein kinase II subunit alpha 2.7.11.1 0.716
1m2q MNXCasein kinase II subunit alpha 2.7.11.1 0.713
3q9w EMOCasein kinase II subunit alpha 2.7.11.1 0.679
1xo2 FSECyclin-dependent kinase 6 2.7.11.22 0.658
4dgm AGICasein kinase II subunit alpha 2.7.11.1 0.657
2o2y TCLEnoyl-ACP reductase / 0.654
4f79 P53Putative phospho-beta-glucosidase / 0.653
2o65 MYFSerine/threonine-protein kinase pim-1 2.7.11.1 0.651
3qwj X6ACyclin-dependent kinase 2 2.7.11.22 0.650