sc-PDB
An Annotated Database of Druggable Binding Sites from the Protein DataBank
An Annotated Database of Druggable Binding Sites from the Protein DataBank
Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
| PDB ID | HET | Uniprot Name | EC Number |
|---|---|---|---|
| 3fbu | COA | Acetyltransferase, GNAT family |
| PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
|---|---|---|---|---|---|
| 3fbu | COA | Acetyltransferase, GNAT family | / | 1.491 | |
| 1ozp | ACO | Mycothiol acetyltransferase | 2.3.1.189 | 0.820 | |
| 1wwz | ACO | Uncharacterized protein | / | 0.804 | |
| 1p0h | COA | Mycothiol acetyltransferase | 2.3.1.189 | 0.779 | |
| 3f8k | COA | Uncharacterized protein | / | 0.768 | |
| 3to6 | LYS_CMC | Histone acetyltransferase ESA1 | / | 0.763 | |
| 3te4 | ACO | Dopamine N-acetyltransferase | / | 0.760 | |
| 4jwp | ACO | GCN5-related N-acetyltransferase | / | 0.760 | |
| 1mja | COA | Histone acetyltransferase ESA1 | / | 0.740 | |
| 3r1k | COA | N-acetyltransferase Eis | / | 0.731 | |
| 1kuv | CA5 | Serotonin N-acetyltransferase | / | 0.730 | |
| 4kub | COA | Uncharacterized protein | / | 0.728 | |
| 2jdc | CAO | Probable acetyltransferase | / | 0.724 | |
| 1s7n | COA | Acetyl transferase | / | 0.723 | |
| 2bsw | CAO | Probable acetyltransferase | / | 0.723 | |
| 1kux | CA3 | Serotonin N-acetyltransferase | / | 0.722 | |
| 2vzz | SCA | Putative succinyl-CoA transferase Rv0802c | 2.8.3 | 0.717 | |
| 1s3z | COA | Aminoglycoside N(6')-acetyltransferase type 1 | / | 0.716 | |
| 2zw4 | COA | Bleomycin acetyltransferase | / | 0.716 | |
| 2zpa | ACO | tRNA(Met) cytidine acetyltransferase TmcA | / | 0.715 | |
| 5ag4 | MYA | Glycylpeptide N-tetradecanoyltransferase | / | 0.714 | |
| 2cnt | COA | Ribosomal-protein-alanine acetyltransferase | / | 0.708 | |
| 3sxn | COA | N-acetyltransferase Eis | / | 0.705 | |
| 3s6f | COA | Uncharacterized protein | / | 0.704 | |
| 2ft0 | ACO | dTDP-fucosamine acetyltransferase | / | 0.702 | |
| 3cz7 | ACO | Histone acetyltransferase RTT109 | 2.3.1.48 | 0.700 | |
| 2qir | COA | Aminoglycoside 6-N-acetyltransferase type Ib11 | / | 0.694 | |
| 3dr8 | ACO | L-methionine sulfoximine/L-methionine sulfone acetyltransferase | / | 0.693 | |
| 2rc4 | ACO | Histone acetyltransferase KAT6A | / | 0.687 | |
| 1cjw | COT | Serotonin N-acetyltransferase | / | 0.683 | |
| 4b11 | NHW | Glycylpeptide N-tetradecanoyltransferase | / | 0.683 | |
| 5h84 | 1VU | Histone acetyltransferase KAT2A | 2.3.1.48 | 0.682 | |
| 4kvx | ACO | N-terminal acetyltransferase A complex catalytic subunit ard1 | 2.3.1.88 | 0.681 | |
| 2r8v | ACO | Amino-acid acetyltransferase | / | 0.680 | |
| 2bei | ACO | Diamine acetyltransferase 2 | 2.3.1.57 | 0.678 | |
| 2vqy | ACO | AAC(6')-Ib | / | 0.677 | |
| 4ri1 | ACO | UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase | 2.3.1.202 | 0.673 | |
| 5kgh | ACO | Predicted acetyltransferase | / | 0.672 | |
| 2ge3 | ACO | Probable acetyltransferase | / | 0.670 | |
| 1ib1 | COT | Serotonin N-acetyltransferase | / | 0.669 | |
| 2jev | NHQ | Diamine acetyltransferase 1 | / | 0.669 | |
| 1kuy | COT | Serotonin N-acetyltransferase | / | 0.666 | |
| 2vxk | COA | Glucosamine 6-phosphate acetyltransferase, putative | / | 0.666 | |
| 2bue | COA | AAC(6')-Ib | / | 0.665 | |
| 3f0a | ACO | Spermidine N(1)-acetyltransferase | / | 0.665 | |
| 5c88 | COA | N-alpha-acetyltransferase | / | 0.665 | |
| 1s7l | COA | Acetyl transferase | / | 0.662 | |
| 1yre | COA | Uncharacterized protein | / | 0.653 |