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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
3cz7 ACO Histone acetyltransferase RTT109 2.3.1.48

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
3cz7 ACOHistone acetyltransferase RTT109 2.3.1.48 1.146
2zfn ACOHistone acetyltransferase RTT109 2.3.1.48 1.129
3q33 ACOHistone acetyltransferase RTT109 2.3.1.48 0.902
1wwz ACOUncharacterized protein / 0.713
1ozp ACOMycothiol acetyltransferase 2.3.1.189 0.712
2cns ACORibosomal-protein-alanine acetyltransferase / 0.708
2ft0 ACOdTDP-fucosamine acetyltransferase / 0.705
5kgj ACOPredicted acetyltransferase / 0.705
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.701
3fbu COAAcetyltransferase, GNAT family / 0.700
4lx9 ACON-alpha-acetyltransferase 2.3.1 0.695
3te4 ACODopamine N-acetyltransferase / 0.691
5kf8 ACOPredicted acetyltransferase / 0.690
5kgh ACOPredicted acetyltransferase / 0.689
3vwd ACOAlpha-tubulin N-acetyltransferase 1 / 0.688
4pzs ACOHistone acetyltransferase p300 / 0.683
1tiq COASpermidine/spermine N(1)-acetyltransferase / 0.681
5kf9 ACOPredicted acetyltransferase / 0.681
4hkf ACOAlpha-tubulin N-acetyltransferase 1 / 0.680
1qsr ACOHAT A1 / 0.677
2x7b COAN-alpha-acetyltransferase 2.3.1 0.677
5h84 1VUHistone acetyltransferase KAT2A 2.3.1.48 0.675
3to6 LYS_CMCHistone acetyltransferase ESA1 / 0.673
4pzr COAHistone acetyltransferase p300 / 0.673
3f0a ACOSpermidine N(1)-acetyltransferase / 0.672
5kf2 ACOPredicted acetyltransferase / 0.671
4b5p ACOAlpha-tubulin N-acetyltransferase 1 / 0.668
1s7n COAAcetyl transferase / 0.667
2ozu ACOHistone acetyltransferase KAT6A / 0.667
3r95 ACOMccE protein / 0.667
5kf1 ACOPredicted acetyltransferase / 0.667
5kgp ACOPredicted acetyltransferase / 0.667
5kf8 COAPredicted acetyltransferase / 0.666
1z4r ACOHistone acetyltransferase KAT2A 2.3.1.48 0.664
1mjb ACOHistone acetyltransferase ESA1 / 0.663
2fiw ACOGCN5-related N-acetyltransferase:Aminotransferase, class-II / 0.662
3r96 ACOMccE protein / 0.662
1pua COAHAT A1 / 0.659
5h86 BCOHistone acetyltransferase KAT2A 2.3.1.48 0.655
1cm0 COAHistone acetyltransferase KAT2B 2.3.1.48 0.654
1j4j ACOAcetyltransferase 2.3.1 0.654
4if5 ACOAlpha-tubulin N-acetyltransferase 1 / 0.654
4r3k COAN-alpha-acetyltransferase 2.3.1 0.653
1pu9 COAHAT A1 / 0.650
2vzz SCAPutative succinyl-CoA transferase Rv0802c 2.8.3 0.650
3k9u ACOSpermidine N(1)-acetyltransferase / 0.650