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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2xht C0Y Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2xht C0YHeat shock protein HSP 90-alpha / 1.013
2xjx XJXHeat shock protein HSP 90-alpha / 0.810
2xjj L81Heat shock protein HSP 90-alpha / 0.804
2vci 2GJHeat shock protein HSP 90-alpha / 0.799
2yi6 6QMHeat shock protein HSP 90-alpha / 0.795
2xhx T5MHeat shock protein HSP 90-alpha / 0.775
2xjg XJGHeat shock protein HSP 90-alpha / 0.743
3k97 4CDHeat shock protein HSP 90-alpha / 0.743
3k98 1RCHeat shock protein HSP 90-alpha / 0.737
1yc3 4BCHeat shock protein HSP 90-alpha / 0.730
1yc4 43PHeat shock protein HSP 90-alpha / 0.724
3hhu 819Heat shock protein HSP 90-alpha / 0.723
2bt0 CT5Heat shock protein HSP 90-alpha / 0.719
1yc1 4BCHeat shock protein HSP 90-alpha / 0.718
3inw JZBHeat shock protein HSP 90-alpha / 0.710
1qy8 RDIEndoplasmin / 0.706
3eko PYUHeat shock protein HSP 90-alpha / 0.706
2byi 2DDHeat shock protein HSP 90-alpha / 0.701
4egk RDCHeat shock protein HSP 90-alpha / 0.689
2uwd 2GGHeat shock protein HSP 90-alpha / 0.686
2ye4 2FYHeat shock protein HSP 90-alpha / 0.683
2ye9 2D4Heat shock protein HSP 90-alpha / 0.682
4egh 0OYHeat shock protein HSP 90-alpha / 0.677
2osc MUHAngiopoietin-1 receptor 2.7.10.1 0.675
2bsm BSMHeat shock protein HSP 90-alpha / 0.674
2pdf ZSTAldose reductase 1.1.1.21 0.659
2vcj 2EQHeat shock protein HSP 90-alpha / 0.659
2q8i RDC[Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial 2.7.11.2 0.650