Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2r0n | TGC | Glutaryl-CoA dehydrogenase, mitochondrial | 1.3.8.6 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
2r0n | TGC | Glutaryl-CoA dehydrogenase, mitochondrial | 1.3.8.6 | 1.274 | |
1jqi | CAA | Short-chain specific acyl-CoA dehydrogenase, mitochondrial | / | 0.741 | |
1sir | NBC | Glutaryl-CoA dehydrogenase, mitochondrial | 1.3.8.6 | 0.688 | |
3mpi | GRA | Glutaryl-CoA dehydrogenase | 1.3.99.32 | 0.683 | |
1rx0 | 2MC | Isobutyryl-CoA dehydrogenase, mitochondrial | 1.3.99 | 0.662 |