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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2q7i TES Androgen receptor

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2q7i TESAndrogen receptor / 1.135
4ofr DHTAndrogen receptor / 1.082
1t79 DHTAndrogen receptor / 1.072
1t7r DHTAndrogen receptor / 1.066
4oey DHTAndrogen receptor / 1.064
4hlw TESAndrogen receptor / 1.051
2ylp TESAndrogen receptor / 1.049
2q7l TESAndrogen receptor / 1.047
2q7k TESAndrogen receptor / 1.038
1t65 DHTAndrogen receptor / 1.030
4oea DHTAndrogen receptor / 1.028
1t7m DHTAndrogen receptor / 1.027
2ama DHTAndrogen receptor / 1.022
1t73 DHTAndrogen receptor / 1.015
2ylq TESAndrogen receptor / 1.010
1t74 DHTAndrogen receptor / 1.000
2am9 TESAndrogen receptor / 1.000
2pit DHTAndrogen receptor / 1.000
2pio DHTAndrogen receptor / 0.995
2pip DHTAndrogen receptor / 0.995
2pkl DHTAndrogen receptor / 0.991
1t76 DHTAndrogen receptor / 0.989
2z4j DHTAndrogen receptor / 0.979
2pix DHTAndrogen receptor / 0.978
2piw DHTAndrogen receptor / 0.972
2piq DHTAndrogen receptor / 0.955
4oed DHTAndrogen receptor / 0.901
1xq3 R18Androgen receptor / 0.881
1xj7 DHTAndrogen receptor / 0.879
2qpy DHTAndrogen receptor / 0.873
1t5z DHTAndrogen receptor / 0.870
4oez DHTAndrogen receptor / 0.858
2ao6 R18Androgen receptor / 0.855
1t7t DHTAndrogen receptor / 0.839
2pnu ENMAndrogen receptor / 0.822
1t63 DHTAndrogen receptor / 0.803
2piu DHTAndrogen receptor / 0.802
1xow R18Androgen receptor / 0.797
4ofu DHTAndrogen receptor / 0.787
2q7j TESAndrogen receptor / 0.763
2pir DHTAndrogen receptor / 0.734
3uzz ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.714
1lhu ESTSex hormone-binding globulin / 0.707
3cas ASD3-oxo-5-beta-steroid 4-dehydrogenase / 0.701
4at2 ASDPossible succinate dehydrogenase / 0.695
1qyw 5SDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.690
1t7f DHTAndrogen receptor / 0.688
2piv DHTAndrogen receptor / 0.687
1lhw ESMSex hormone-binding globulin / 0.684
2qo5 CHDFatty acid-binding protein 10-A, liver basic / 0.684
3nhx ASDSteroid Delta-isomerase 5.3.3.1 0.683
3w5q 3KLVitamin D3 receptor / 0.680
3cot STR3-oxo-5-beta-steroid 4-dehydrogenase / 0.678
1lho AOMSex hormone-binding globulin / 0.677
3up0 D7SaceDAF-12 / 0.677
3zqt TESAndrogen receptor / 0.677
4j26 ESTEstrogen receptor beta / 0.673
2ylo TESAndrogen receptor / 0.671
4e5l DBHPolymerase acidic protein / 0.670
2j7x ESTEstrogen receptor beta / 0.669
4q0a 4OAVitamin D3 receptor A / 0.667
3g1r FIT3-oxo-5-beta-steroid 4-dehydrogenase / 0.663
3iw1 ASDSteroid C26-monooxygenase 1.14.13.141 0.663
4j24 ESTEstrogen receptor beta / 0.663
1ot7 CHCBile acid receptor / 0.660
1xu7 CPSCorticosteroid 11-beta-dehydrogenase isozyme 1 1.1.1.146 0.660
3up3 XCAaceDAF-12 / 0.660
3w5p 4OAVitamin D3 receptor / 0.660
2yhd TESAndrogen receptor / 0.659
3f3y 4OABile salt sulfotransferase 2.8.2.14 0.659
4udc DEXGlucocorticoid receptor / 0.659
1lhv NOGSex hormone-binding globulin / 0.658
1coy ANDCholesterol oxidase 1.1.3.6 0.652
5epo TUD7-alpha-hydroxysteroid deydrogenase / 0.652
3w5t LHPVitamin D3 receptor / 0.650