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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2j9h GTX Glutathione S-transferase P 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2j9h GTXGlutathione S-transferase P 2.5.1.18 1.258
9gss GTXGlutathione S-transferase P 2.5.1.18 1.093
17gs GTXGlutathione S-transferase P 2.5.1.18 1.037
12gs 0HHGlutathione S-transferase P 2.5.1.18 1.000
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.970
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.947
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.924
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.914
4gss GTXGlutathione S-transferase P 2.5.1.18 0.885
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.879
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.876
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.848
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.847
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.824
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.814
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.778
1gss LEEGlutathione S-transferase P 2.5.1.18 0.768
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.735
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.698
3l0h GTXGlutathione S-transferase A1 2.5.1.18 0.697
2oa7 GTXGlutathione S-transferase P 1 2.5.1.18 0.693
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.690
3frc 0HGGlutathione S-transferase 2.5.1.18 0.690
1b4p GPSGlutathione S-transferase Mu 2 / 0.665
1q4j GTXGlutathione S-transferase 2.5.1.18 0.665
1bx9 GLY_GGL_FOEGlutathione S-transferase F2 2.5.1.18 0.656
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.650