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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2gtn LIE Mitogen-activated protein kinase 14

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2gtn LIEMitogen-activated protein kinase 14 / 1.205
2gtm LIDMitogen-activated protein kinase 14 / 0.917
3fkn FKNMitogen-activated protein kinase 14 / 0.764
1zzl TZYMitogen-activated protein kinase 14 / 0.738
3ttj JBIMitogen-activated protein kinase 10 2.7.11.24 0.721
3iw6 PP0Mitogen-activated protein kinase 14 / 0.684
3zsh 469Mitogen-activated protein kinase 14 / 0.684
1di9 MSQMitogen-activated protein kinase 14 / 0.669
3fmm XI2Mitogen-activated protein kinase 14 / 0.664
2vwu 7X1Ephrin type-B receptor 4 2.7.10.1 0.659
3hp5 52PMitogen-activated protein kinase 14 / 0.659
3fmn 530Mitogen-activated protein kinase 14 / 0.652
3fly FLYMitogen-activated protein kinase 14 / 0.650