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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2ft0 ACO dTDP-fucosamine acetyltransferase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2ft0 ACOdTDP-fucosamine acetyltransferase / 1.127
4ri1 ACOUDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase 2.3.1.202 0.709
3cz7 ACOHistone acetyltransferase RTT109 2.3.1.48 0.705
2vzz SCAPutative succinyl-CoA transferase Rv0802c 2.8.3 0.704
3fbu COAAcetyltransferase, GNAT family / 0.702
3k9u ACOSpermidine N(1)-acetyltransferase / 0.698
3to6 LYS_CMCHistone acetyltransferase ESA1 / 0.698
1ozp ACOMycothiol acetyltransferase 2.3.1.189 0.697
1wwz ACOUncharacterized protein / 0.695
3f0a ACOSpermidine N(1)-acetyltransferase / 0.692
1ib1 COTSerotonin N-acetyltransferase / 0.688
1yre COAUncharacterized protein / 0.683
2zfn ACOHistone acetyltransferase RTT109 2.3.1.48 0.682
1qsr ACOHAT A1 / 0.676
3te4 ACODopamine N-acetyltransferase / 0.673
4kvx ACON-terminal acetyltransferase A complex catalytic subunit ard1 2.3.1.88 0.673
2rc4 ACOHistone acetyltransferase KAT6A / 0.670
4ua3 COAN-alpha-acetyltransferase 40 2.3.1 0.668
1p0h COAMycothiol acetyltransferase 2.3.1.189 0.667
1z4r ACOHistone acetyltransferase KAT2A 2.3.1.48 0.667
5h86 BCOHistone acetyltransferase KAT2A 2.3.1.48 0.666
2vqy ACOAAC(6')-Ib / 0.662
3r95 ACOMccE protein / 0.661
3r96 ACOMccE protein / 0.661
5kf8 COAPredicted acetyltransferase / 0.661
1pu9 COAHAT A1 / 0.658
2b3v ACODiamine acetyltransferase 1 / 0.658
2o28 COAGlucosamine 6-phosphate N-acetyltransferase / 0.658
5kgj ACOPredicted acetyltransferase / 0.658
5kf2 ACOPredicted acetyltransferase / 0.657
5kgp ACOPredicted acetyltransferase / 0.656
2prb COAAminoglycoside 6-N-acetyltransferase type Ib11 / 0.655
5kf9 ACOPredicted acetyltransferase / 0.653
2bue COAAAC(6')-Ib / 0.652
5kf8 ACOPredicted acetyltransferase / 0.651