Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
2biy ATP 3-phosphoinositide-dependent protein kinase 1 2.7.11.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
2biy ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.831
3hrc ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.784
1h1w ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.776
4xx9 ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.763
4rqv ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.740
4ct1 ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.728
4rqk ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.725
3hrf ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.707
4a06 ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.700
4rrv ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.697
5ack ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.683
4ct2 ATP3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.678
2w4j ADPDeath-associated protein kinase 1 2.7.11.1 0.655
1jkl ANPDeath-associated protein kinase 1 2.7.11.1 0.654
1jkk ANPDeath-associated protein kinase 1 2.7.11.1 0.652
4ckj ADNProto-oncogene tyrosine-protein kinase receptor Ret 2.7.10.1 0.652
1ig1 ANPDeath-associated protein kinase 1 2.7.11.1 0.650