Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
2a7r | 5GP | GMP reductase 2 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
2a7r | 5GP | GMP reductase 2 | / | 0.886 | |
2bwg | 5GP | GMP reductase 1 | / | 0.732 | |
2cu0 | XMP | Inosine-5'-monophosphate dehydrogenase | / | 0.713 | |
4qq3 | XMP | Inosine-5'-monophosphate dehydrogenase | / | 0.679 | |
1me7 | RVP | Inosine-5'-monophosphate dehydrogenase | / | 0.673 | |
1nf7 | RVP | Inosine-5'-monophosphate dehydrogenase 2 | / | 0.670 | |
4zqm | XMP | Inosine-5'-monophosphate dehydrogenase | / | 0.661 | |
1me8 | RVP | Inosine-5'-monophosphate dehydrogenase | / | 0.657 |