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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1zxl JP1 Enoyl-ACP reductase

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1zxl JP1Enoyl-ACP reductase / 1.060
2o2s TCLEnoyl-acyl carrier reductase / 0.828
3am3 TCLEnoyl-ACP reductase / 0.813
1zw1 TN5Enoyl-ACP reductase / 0.795
1nhg TCLEnoyl-ACP reductase / 0.790
1uh5 TCLEnoyl-ACP reductase / 0.781
3nj8 NJ8Enoyl-acyl carrier reductase / 0.740
2o2y TCLEnoyl-ACP reductase / 0.736
1d7o TCLEnoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic 1.3.1.9 0.735
1nnu TCTEnoyl-ACP reductase / 0.726
2b35 TCLEnoyl-[acyl-carrier-protein] reductase [NADH] 1.3.1.9 0.722
2foi JPAEnoyl-acyl carrier reductase / 0.721
1zsn TN2Enoyl-ACP reductase / 0.717
1nhw TCCEnoyl-ACP reductase / 0.713
3am5 TCLEnoyl-ACP reductase / 0.703
3fnf JPMEnoyl-[acyl-carrier-protein] reductase [NADH] 1.3.1.9 0.700
3lt2 FT3Enoyl-ACP reductase / 0.692
3nrc TCLEnoyl-[acyl-carrier-protein] reductase [NADH] / 0.672