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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1v0o INR Cell division control protein 2 homolog 2.7.11.22

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1v0o INRCell division control protein 2 homolog 2.7.11.22 1.089
1e9h INRCyclin-dependent kinase 2 2.7.11.22 0.834
4fx3 60KCyclin-dependent kinase 2 2.7.11.22 0.804
1unh IXMCyclin-dependent-like kinase 5 2.7.11.1 0.789
2wip P49Cyclin-dependent kinase 2 2.7.11.22 0.736
4fkt 48KCyclin-dependent kinase 2 2.7.11.22 0.736
1q41 IXMGlycogen synthase kinase-3 beta 2.7.11.26 0.730
4qmt H1NSerine/threonine-protein kinase 24 2.7.11.1 0.728
3ti1 B49Cyclin-dependent kinase 2 2.7.11.22 0.722
4fkw 62KCyclin-dependent kinase 2 2.7.11.22 0.721
1ke6 LS2Cyclin-dependent kinase 2 2.7.11.22 0.717
2vti LZ3Cyclin-dependent kinase 2 2.7.11.22 0.712
1fvt 106Cyclin-dependent kinase 2 2.7.11.22 0.693
1ke9 LS5Cyclin-dependent kinase 2 2.7.11.22 0.693
2wpa 889Cyclin-dependent kinase 2 2.7.11.22 0.693
2pe1 5173-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.688
1fvv 107Cyclin-dependent kinase 2 2.7.11.22 0.684
2qkr IXMCdc2-like CDK2/CDC28 like protein kinase / 0.684
2hxq 373Serine/threonine-protein kinase Chk1 2.7.11.1 0.683
3l9l L9LcAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.681
3hzt J60Calmodulin-like domain protein kinase isoform 3 / 0.680
3bqr 4RBDeath-associated protein kinase 3 / 0.679
2pe0 39Z3-phosphoinositide-dependent protein kinase 1 2.7.11.1 0.678
4agd B49Vascular endothelial growth factor receptor 2 2.7.10.1 0.675
2bts U32Cyclin-dependent kinase 2 2.7.11.22 0.674
2zv2 609Calcium/calmodulin-dependent protein kinase kinase 2 2.7.11.17 0.673
3tki S25Serine/threonine-protein kinase Chk1 2.7.11.1 0.671
4fkr 45KCyclin-dependent kinase 2 2.7.11.22 0.671
4fkv 61KCyclin-dependent kinase 2 2.7.11.22 0.670
4fsn A58Serine/threonine-protein kinase Chk1 2.7.11.1 0.669
2gdo 12CSerine/threonine-protein kinase Chk1 2.7.11.1 0.667
4fks 46KCyclin-dependent kinase 2 2.7.11.22 0.667
1p2a 5BNCyclin-dependent kinase 2 2.7.11.22 0.666
2xik J60Serine/threonine-protein kinase 25 2.7.11.1 0.666
2e9o A58Serine/threonine-protein kinase Chk1 2.7.11.1 0.665
3py0 SU9Cyclin-dependent kinase 2 2.7.11.22 0.664
2hy0 306Serine/threonine-protein kinase Chk1 2.7.11.1 0.663
3axw TIDCasein kinase II subunit alpha 2.7.11.1 0.662
3mtl FEFCyclin-dependent kinase 16 2.7.11.22 0.662
3g0f B49Mast/stem cell growth factor receptor Kit 2.7.10.1 0.661
4ftq 4HKSerine/threonine-protein kinase Chk1 2.7.11.1 0.661
4fkp LS5Cyclin-dependent kinase 2 2.7.11.22 0.660
4fsm HK1Serine/threonine-protein kinase Chk1 2.7.11.1 0.660
3ezr EZRCyclin-dependent kinase 2 2.7.11.22 0.658
3bgz VX3Serine/threonine-protein kinase pim-1 2.7.11.1 0.657
4ag8 AXIVascular endothelial growth factor receptor 2 2.7.10.1 0.657
2uzw SS4cAMP-dependent protein kinase catalytic subunit alpha 2.7.11.11 0.656
2wxv WXVCyclin-dependent kinase 2 2.7.11.22 0.656
3tiz 3TICyclin-dependent kinase 2 2.7.11.22 0.656
4agc AXIVascular endothelial growth factor receptor 2 2.7.10.1 0.655
2yac 937Serine/threonine-protein kinase PLK1 2.7.11.21 0.654
1ke8 LS4Cyclin-dependent kinase 2 2.7.11.22 0.653
4aw5 30KEphrin type-B receptor 4 2.7.10.1 0.652
2hog 710Serine/threonine-protein kinase Chk1 2.7.11.1 0.651
3c7q XINVascular endothelial growth factor receptor 2 2.7.10.1 0.651