Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1uy6 PU3 Heat shock protein HSP 90-alpha

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1uy6 PU3Heat shock protein HSP 90-alpha / 0.993
1uym PU3Heat shock protein HSP 90-beta / 0.911
1uyf PU1Heat shock protein HSP 90-alpha / 0.885
1uyc PU7Heat shock protein HSP 90-alpha / 0.747
2fwz H71Heat shock protein HSP 90-alpha / 0.697
1uyh PU0Heat shock protein HSP 90-alpha / 0.669
3ezv EZVCyclin-dependent kinase 2 2.7.11.22 0.654