Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
1uwz | THU | Cytidine deaminase | 3.5.4.5 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
1uwz | THU | Cytidine deaminase | 3.5.4.5 | 1.024 | |
1ux0 | THU | Cytidine deaminase | 3.5.4.5 | 1.000 | |
1jtk | THU | Cytidine deaminase | 3.5.4.5 | 0.988 | |
1mq0 | BRD | Cytidine deaminase | 3.5.4.5 | 0.786 | |
4e5l | DBH | Polymerase acidic protein | / | 0.657 | |
4dlc | UMP | Deoxyuridine triphosphatase, putative | / | 0.654 |