Binding Modes are compared using Grim.
For more information, please see the following publication:
Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65
PDB ID | HET | Uniprot Name | EC Number |
---|---|---|---|
1q6p | 213 | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 |
PDB ID | HET | Uniprot Name | EC Number | Binding Mode Similarity |
Align |
---|---|---|---|---|---|
1q6p | 213 | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 | 1.383 | |
1q6t | 600 | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 | 1.250 | |
1q6s | 214 | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 | 1.113 | |
2fjn | 073 | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 | 1.091 | |
1q6n | P90 | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 | 1.030 | |
2fjm | 073 | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 | 0.883 | |
4ge5 | A89 | Tyrosine-protein phosphatase non-receptor type 9 | 3.1.3.48 | 0.738 | |
4gfv | PRO_GLU_LEU_THR_PTR | Tyrosine-protein phosphatase non-receptor type 18 | 3.1.3.48 | 0.716 | |
1jf7 | TBH | Tyrosine-protein phosphatase non-receptor type 1 | 3.1.3.48 | 0.666 | |
4umy | NAP | Isocitrate dehydrogenase [NADP] cytoplasmic | 1.1.1.42 | 0.662 | |
4co4 | ATP | Nitrogen regulatory protein P-II 1 | / | 0.659 | |
3zlm | ANP | Adenosine monophosphate-protein transferase NmFic | 2.7.7.n1 | 0.657 | |
3w2w | ATP | CRISPR system Cmr subunit Cmr2 | / | 0.650 |