Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1q6i FK5 FKBP-type peptidyl-prolyl cis-trans isomerase FkpA 5.2.1.8

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1q6i FK5FKBP-type peptidyl-prolyl cis-trans isomerase FkpA 5.2.1.8 1.039
4odo FK5Peptidyl-prolyl cis-trans isomerase / 0.810
1fkf FK5Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.780
1fkj FK5Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.772
2fke FK5Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.770
4dz2 FK5Peptidyl-prolyl cis-trans isomerase / 0.751
1g7u PEP2-dehydro-3-deoxyphosphooctonate aldolase 2.5.1.55 0.744
1fkd 818Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.742
1bkf FK5Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.737
4qt3 RAPPeptidylprolyl isomerase / 0.736
1c9h RAPPeptidyl-prolyl cis-trans isomerase FKBP1B 5.2.1.8 0.730
2dg3 RAPPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.730
4lay I63Peptidyl-prolyl cis-trans isomerase FKBP4 5.2.1.8 0.727
4dh0 MR8Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.718
3o5r FK5Peptidyl-prolyl cis-trans isomerase FKBP5 5.2.1.8 0.711
3ihz FK5Peptidylprolyl isomerase / 0.709
4drn 0MCPeptidyl-prolyl cis-trans isomerase FKBP5 5.2.1.8 0.699
1fkb RAPPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.697
1qpl 587Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.694
1bl4 AP1Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.684
2dg4 RAPPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.682
1fkh SBXPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.679
1qpf 858Peptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.672
1j4h SUBPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.666
2dg9 RAPPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.665
4e5f 0N7Polymerase acidic protein / 0.660
1a7x FKAPeptidyl-prolyl cis-trans isomerase FKBP1A 5.2.1.8 0.658