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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1lhw ESM Sex hormone-binding globulin

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1lhw ESMSex hormone-binding globulin / 1.209
3bur TES3-oxo-5-beta-steroid 4-dehydrogenase / 0.710
1gwr ESTEstrogen receptor / 0.709
2ocf ESTEstrogen receptor / 0.708
2g5o DRQEstrogen receptor / 0.703
1lhu ESTSex hormone-binding globulin / 0.699
1g50 ESTEstrogen receptor / 0.696
3uud ESTEstrogen receptor / 0.695
4pxm ESTEstrogen receptor / 0.694
2q7i TESAndrogen receptor / 0.684
1xj7 DHTAndrogen receptor / 0.675
4at2 ASDPossible succinate dehydrogenase / 0.670
4j6d TESCytochrome P450 monooxygenase / 0.668
2yja ESTEstrogen receptor / 0.665
3zqt TESAndrogen receptor / 0.665
1qyw 5SDEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.664
2qgt EEDEstrogen receptor / 0.664
3cot STR3-oxo-5-beta-steroid 4-dehydrogenase / 0.664
3ols ESTEstrogen receptor beta / 0.664
4j26 ESTEstrogen receptor beta / 0.664
1i5r HYCEstradiol 17-beta-dehydrogenase 1 1.1.1.62 0.660
2ylo TESAndrogen receptor / 0.660
3i68 J4ZDihydroorotate dehydrogenase (quinone), mitochondrial 1.3.5.2 0.659
2q7l TESAndrogen receptor / 0.656
3oll ESTEstrogen receptor beta / 0.656
4e5l DBHPolymerase acidic protein / 0.653