Logo scPDB

sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

Logo CNRS Logo Unistra
Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1kw0 H4B Phenylalanine-4-hydroxylase 1.14.16.1

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1kw0 H4BPhenylalanine-4-hydroxylase 1.14.16.1 0.984
1mmk H4BPhenylalanine-4-hydroxylase 1.14.16.1 0.873
1j8u H4BPhenylalanine-4-hydroxylase 1.14.16.1 0.783
3h2n B62Dihydropteroate synthase / 0.662
1tg2 H2BPhenylalanine-4-hydroxylase 1.14.16.1 0.653
2dzb HH2Dihydropteroate synthase / 0.652