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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1gss LEE Glutathione S-transferase P 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1gss LEEGlutathione S-transferase P 2.5.1.18 1.294
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.966
12gs 0HHGlutathione S-transferase P 2.5.1.18 0.894
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.892
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.876
17gs GTXGlutathione S-transferase P 2.5.1.18 0.848
4gss GTXGlutathione S-transferase P 2.5.1.18 0.828
9gss GTXGlutathione S-transferase P 2.5.1.18 0.825
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.817
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.815
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.812
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.794
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.794
2j9h GTXGlutathione S-transferase P 2.5.1.18 0.768
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.754
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.746
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.740
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.711
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.707
2aaw GTXGlutathione S-transferase 2.5.1.18 0.702
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.694
1guh GSBGlutathione S-transferase A1 2.5.1.18 0.688
3frc 0HGGlutathione S-transferase 2.5.1.18 0.683
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.677
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.675
1vf3 GDNGlutathione S-transferase 3 2.5.1.18 0.673
1k0c GTBTranscriptional regulator URE2 / 0.669
6gsu GPSGlutathione S-transferase Mu 1 2.5.1.18 0.669
3f63 GTXGlutathione transferase GST1-4 / 0.665
4iji 99TGlutathione S-transferase-like protein YibF / 0.665
5fwg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.664
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.662
1k3l GTXGlutathione S-transferase A1 2.5.1.18 0.661
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.657
6gsw GPSGlutathione S-transferase Mu 1 2.5.1.18 0.653