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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
1b4p GPS Glutathione S-transferase Mu 2

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
1b4p GPSGlutathione S-transferase Mu 2 / 1.171
2gst GPSGlutathione S-transferase Mu 1 2.5.1.18 0.990
6gsx GPSGlutathione S-transferase Mu 1 2.5.1.18 0.983
3gst GPRGlutathione S-transferase Mu 1 2.5.1.18 0.964
6gsv GPSGlutathione S-transferase Mu 1 2.5.1.18 0.920
6gsw GPSGlutathione S-transferase Mu 1 2.5.1.18 0.919
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.913
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.908
6gsu GPSGlutathione S-transferase Mu 1 2.5.1.18 0.890
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.834
5fwg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.822
2f3m GTDGlutathione S-transferase Mu 1 2.5.1.18 0.794
1mtc GPRGlutathione S-transferase Mu 1 2.5.1.18 0.789
3gur BYGGlutathione S-transferase Mu 2 2.5.1.18 0.780
1gsu GTXGlutathione S-transferase 2 2.5.1.18 0.775
1m9a GTXGlutathione S-transferase class-mu 26 kDa isozyme 2.5.1.18 0.770
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.755
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.735
3fyg GPRGlutathione S-transferase Mu 1 2.5.1.18 0.729
3frc 0HGGlutathione S-transferase 2.5.1.18 0.728
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.718
1pn9 GTXGlutathione S-transferase 1, isoform D 2.5.1.18 0.709
2gsq GBIGlutathione S-transferase 2.5.1.18 0.700
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.699
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.692
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.692
9gss GTXGlutathione S-transferase P 2.5.1.18 0.690
1q4j GTXGlutathione S-transferase 2.5.1.18 0.669
1c72 EPYGlutathione S-transferase 2 2.5.1.18 0.668
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.668
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.667
2j9h GTXGlutathione S-transferase P 2.5.1.18 0.665
12gs 0HHGlutathione S-transferase P 2.5.1.18 0.659
1k3y GTXGlutathione S-transferase A1 2.5.1.18 0.658
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.654