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sc-PDB

An Annotated Database of Druggable Binding Sites from the Protein DataBank

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Distribution of Interaction pattern similarity measured by Grim
You can zoom onto the graph by using the mouse to make a selection

Binding Modes are compared using Grim.
For more information, please see the following publication: Desaphy J. et al. Encoding Protein-Ligand Interaction Patterns in Fingerprints and Graphs J. Chem. Inf. Model., 2013, 53 (3), pp 623-637
Binding modes are considered as similar when the similarity value is greater than 0.65


Reference Protein Data Bank Entry :
PDB ID HET Uniprot Name EC Number
12gs 0HH Glutathione S-transferase P 2.5.1.18

Complex with similar interaction patterns:

PDB ID HET Uniprot Name EC Number Binding Mode
Similarity		 Align
12gs 0HHGlutathione S-transferase P 2.5.1.18 1.289
9gss GTXGlutathione S-transferase P 2.5.1.18 1.158
17gs GTXGlutathione S-transferase P 2.5.1.18 1.123
4gss GTXGlutathione S-transferase P 2.5.1.18 1.037
2j9h GTXGlutathione S-transferase P 2.5.1.18 1.000
2a2s GSNGlutathione S-transferase P 2.5.1.18 0.995
2pgt GPRGlutathione S-transferase P 2.5.1.18 0.967
1pgt GTXGlutathione S-transferase P 2.5.1.18 0.949
3o76 GTBGlutathione S-transferase P 1 2.5.1.18 0.919
1aqv 0HGGlutathione S-transferase P 2.5.1.18 0.895
1gss LEEGlutathione S-transferase P 2.5.1.18 0.894
2oad GTBGlutathione S-transferase P 1 2.5.1.18 0.827
4pgt GBXGlutathione S-transferase P 2.5.1.18 0.823
1tu8 GTXGlutathione S-transferase 2 2.5.1.18 0.819
1aqx GTDGlutathione S-transferase P 2.5.1.18 0.765
1f3b GBXGlutathione S-transferase A1 2.5.1.18 0.762
2glr GTXGlutathione S-transferase P 1 2.5.1.18 0.758
1gul GLY_GGL_ICYGlutathione S-transferase A4 2.5.1.18 0.749
3pgt GBXGlutathione S-transferase P 2.5.1.18 0.746
2aaw GTXGlutathione S-transferase 2.5.1.18 0.740
1gti GTBGlutathione S-transferase P 1 2.5.1.18 0.730
2oac GTBGlutathione S-transferase P 1 2.5.1.18 0.728
2c4j GSOGlutathione S-transferase Mu 2 2.5.1.18 0.686
2vo4 GTB2,4-D inducible glutathione S-transferase / 0.686
1hna GDNGlutathione S-transferase Mu 2 2.5.1.18 0.684
2r6k GTXGlutathione S-transferase A1 2.5.1.18 0.671
5agy GTBTau class glutathione S-transferase / 0.662
1b4p GPSGlutathione S-transferase Mu 2 / 0.659
3gst GPRGlutathione S-transferase Mu 1 2.5.1.18 0.657
4gst GTDGlutathione S-transferase Mu 1 2.5.1.18 0.650
4hj2 LZ6Glutathione S-transferase A1 2.5.1.18 0.650